Page 177 - Applied Probability
P. 177

8. The Polygenic Model
                              162
                                   random sample z 1,...,z l in a manner that leaves the loglikelihood
                                   invariant up to a known multiplicative constant. Show that this re-
                                   quirement can be expressed formally as
                                                                      k
                                              k

                                             − ln | det Ω|−  k  tr Ω −1  1  	 (y j − µ)(y j − µ) t
                                              2            2       k
                                                                     j=1
                                                                                         
                                                                        l
                                                 l            l    −1  1  	             t
                                                                                         
                                         = −c      ln | det Ω|−  tr Ω     (z j − µ)(z j − µ)
                                               2             2       l
                                                                       j=1                
                                   for some constant c. Matching terms involving ln | det Ω| forces the
                                             k
                                   choice c = .Given c, we then take
                                             l
                                              l                        k
                                           1  	              t      1  	              t
                                               (z j − µ)(z j − µ)  =    (y j − µ)(y j − µ) .
                                           l                        k
                                             j=1                      j=1
                                   Prove that this last equality holds for all µ if and only if ¯ z =¯ y and
                                         l                       k
                                       1  	              t     1  	              t
                                           (z j − ¯ z)(z j − ¯ z)  =  (y j − ¯ y)(y j − ¯ y)  = S. (8.18)
                                       l                      k
                                        j=1                     j=1
                                   Until this point, we have not specified the reduced sample size l.If
                                   each y j has m components, we claim that we can take l = m +1.
                                   This claim is based on constructing m+1 vectors v 1 ,...,v m+1 in R m
                                   satisfying
                                                             m+1

                                                                    = 0                   (8.19)
                                                                 v j
                                                             j=1
                                                           m+1
                                                       m   	      t
                                                               v j v j  = I m×m ,
                                                     m +1
                                                           j=1
                                   where I m×m is the m × m identity matrix. Given these vectors and
                                                                          t
                                   given the Cholesky decomposition S = MM of the sample variance
                                                                       √
                                   of the sequence y 1 ,...,y k , we define z j =  mMv j +¯ y. Show that this
                                   construction yields the sample mean equality ¯ z =¯ y and the sample
                                   variance equality (8.18).
                                   Thus, it remains to construct the sequence v 1 ,...,v m+1 . Although
                                   geometrically the vectors form the vertices of a regular tetrahedron,
                                   we proceed in a purely algebraic fashion. For m = 1, the trivial choice
                                   v 1 = (1) and v 2 =(−1) clearly meets the stated requirements. If
                                   v 1 ,... ,v m work in R m−1 , then verify by induction that the vectors
                                                            √
                                                                   −2
                                                          v j 1 − m
                                                 w j  =         −1         1 ≤ j ≤ m
                                                             −m
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