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11. Radiation Hybrid Mapping
                              246
                              the interval by the lower triangular transformation
                                                      ,
                                                                 i =0
                                                        t 1
                                                                                         (11.18)
                                                   =
                                               δ i
                                                                 1 ≤ i ≤ m − 1.
                                                        t i+1 − t i
                              Because the t i correspond to order statistics from the uniform distribution
                              on [0,d], the positions vector (t 1 ,... ,t m ) has uniform density m!/d m  on
                              the set
                                            {(t 1 ,...,t m ):0 ≤ t 1 ≤· · · ≤ t m ≤ d}.
                              The fact that the Jacobian of the transformation (11.18) is 1 implies that
                              the spacings vector (δ 0 ,... ,δ m−1 ) has uniform density m!/d m  on the set
                                                                          m−1

                                     {(δ 0 ,... ,δ m−1 ): 0 ≤ δ i ,i =0,... ,m − 1,  δ i ≤ d}.
                                                                          i=0
                              The marginal density of the subvector (δ 1 ,...,δ m−1 ) can now be recovered
                              by the integration
                                                     m!          m!(d − δ 1 −· · · − δ m−1 )
                                         d−δ 1 −···−δ m−1

                                                        dδ 0  =            m          .
                                                      m
                                                     d                    d
                                        0
                              This prior for the spacings δ 1 ,...,δ m−1 resides on the set
                                                                          m−1

                                     {(δ 1 ,... ,δ m−1 ): 0 ≤ δ i ,i =1,... ,m − 1,  δ i ≤ d}.
                                                                          i=1
                                A uniform prior on [0,1] is plausible for the retention probability r. This
                              prior should be independent of the prior on the spacings. With the resulting
                                                                                           t
                              product prior now fixed for the parameter vector γ =(δ 1 ,...,δ m−1 ,r) ,we
                              can estimate parameters by maximizing the log posterior L(γ)+ R(γ),
                              where L(γ) is the loglikelihood and
                                               R(γ)= ln(d − δ 1 −· · · − δ m−1 )
                              is the log prior. This yields the posterior mode. Because the M step
                              is intractable, the EM algorithm no longer directly applies. However, in-
                              tractability of the M step is no hindrance to the EM gradient algorithm
                              [13]. If Q(γ | γ old ) is the standard Q function produced by the E step of
                              the EM algorithm, then the EM gradient algorithm updates γ via
                                                                                   −1

                                                                          2
                                                          20
                                               = γ old − d Q(γ old | γ old )+ d R(γ old )  (11.19)
                                         γ new
                                                                          t
                                                      × [dL(γ old)+ dR(γ old )] ,
                                                                                2
                              where dL and dR denote the differentials of L and R, d R is the second
                                                  20
                              differential of R, and d Q(γ | γ old ) is the second differential of Q relative
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