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1.5 Directed Evolution of Peroxidases and Peroxygenases  13


                          Extracellular                                              (a)
                            Medium
                Glycosylation
               Side chain                            SP                SP
                  Core                Cellular wall
                 Polypeptide                                                 SP
                   Pre-leader
                                               SP
                   Pro-leader
                     VP
                                                                    KEX2
                                                                                Golgi

                                                      STE13
                  Mature Vp
                  Ribosome   VP
                                                                     KREAEA
                     mRNA
                                                      EAEA
                                                                          Cytoplasm


                   α-pre  α-pre       αvр  2      (b)  α-pre  α-pre       αvр  2     (c)

                  Peptidase  KEX2STE13                Peptidase    KEX2
                   ...AKEEGVSLEKR EAEA ATCDDGRTTA...      ...AKEEGVSLEKR ATCDDGRTTA...

                            KEX2STE13                              KEX2


                                                              Correctly processed
               (1)  Suggested processing  (2)  AIternative processing
                                                               truncated variants
                                 EAEA
               Figure 1.4  (a) General overview of protein processing, maturation and exocytosis in yeast.
               (b,c) Processing of the α-factor prepro-leader with/without N-terminal extension (EAEA).
                                                                   ◦
               additional stabilizing mutations. The 2-1B mutant exhibited a T  8 C higher than
                                                                50
               that of the parental type, together with a broader thermoactivity range (from 30 to
                 ◦
                                     ◦
               45 C in the parent to 30–50 C for 2-1B). However, some unexpected side-effects
               as a consequence of the whole laboratory evolution process were observed:
               (i) The enzyme’s stability at alkaline pH increased significantly, with ∼60%
                   of its residual activity retained at pH 9.0. Bearing in mind that all known
                   ligninolytic peroxidases are unstable at neutral/alkaline pHs (because of
                   the loss of structural Ca 2+  ions), this represents a suitable departure point
                   for further engineering of VPs that act at basic pHs (Gonzalez-Perez, D.,
                   Garcia-Ruiz, E., and Alcalde, M., unpublished material).
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