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354      GLOSSARY

                                   different locations in the image plane. The degree of aberration increases with the
                                   decreasing focal ratio of the lens. The aberration can be corrected in simple lenses by
                                   creating aspherical surfaces. 52
                                Stepper motor. A motor whose drive shaft does not rotate continuously, but advances in
                                   discrete intervals or steps. 205
                                Stokes shift. The distance in nanometers between the peak excitation and peak emission
                                   wavelengths of a fluorescent dye. 182
                                Subarray readout. An option for image acquisition with a CCD camera whereby a por-
                                   tion of the total available imaging area of the CCD is selected as the active area for
                                   acquiring an image. Selection of the subarray region is made in the image acquisition
                                   software. In subarray readout mode, the acquisition rate is fast, and images take up
                                   less storage space on the hard drive. 269
                                Super-resolution. In electronic imaging, the increase in spatial resolution made possi-
                                   ble by adjusting the gain and offset of a camera. In confocal microscopy, super-
                                   resolution is obtained by constricting the confocal pinhole to about one-quarter of the
                                   Airy disk diameter. 216
                                Surround wave or background wave. In phase contrast and other modes of interfer-
                                   ence microscopy, waves that traverse an object but do not interact with it. Surround
                                   waves are not deviated by the object and do not become altered in phase. For pur-
                                   poses of describing diffraction and interference, such waves are called the 0th-order
                                   component. Surround (S) waves combine with diffracted (D) waves through interfer-
                                   ence in the image plane to generate resultant particle (P) waves of altered amplitude
                                   that are perceived by the eye. See also Diffracted wave and Particle wave. 99
                                System MTF. A function describing the percent modulation (percent reduction in the
                                   peak to trough amplitude difference for a signal) of a signal resulting from transit
                                   through a series of signal-handling devices. For a cascaded series of devices, the sys-
                                   tem MTF for a given frequency f is the product of the values of percent modulation
                                   for each individual component in the system so that % modulation of the system
                                   a%   b%   c% . . . 252
                                Thermal noise. In CCD imaging, the noise of the thermal signal in an image caused by
                                   the kinetic vibration of silicon atoms in the matrix of a CCD device. Thermal noise
                                   is considerably reduced by cooling the CCD to 	20°C. Low-light-level cameras
                                   used in astronomy are sometimes cooled to the temperature of liquid nitrogen to
                                   effectively eliminate thermal noise. 264
                                Thin lens. A lens whose thickness is small compared to its focal length. A line through
                                   the center of the lens (a plane representing the two coincident principal planes of the
                                   lens) provides a reasonably accurate reference plane for refraction and object and
                                   lens distance measurements. Lenses are assumed to be thin when demonstrating the
                                   principles of graphical ray tracing. 45
                                Tube lens or Telan lens. An auxiliary lens in the body of the microscope, which in con-
                                   junction with an infinity focus objective lens forms the real intermediate image. The
                                   Telan lens provides some of the correction for chromatic aberration, which lessens
                                   constraints on the manufacture of the objective lens. 50
                                Two-photon and multi-photon laser scanning microscopy. In laser scanning confocal
                                   microscopy, a method of fluorochrome excitation based on an infrared laser beam
                                   whose energy density is adjusted to allow frequency doubling or tripling at the point
                                   of beam focus in the specimen. Thus, molecules that simultaneously absorb two or
                                   three photons of 900 nm fluoresce the same as if excited by a single higher-energy
                                   photon of 450 or 300 nm, respectively. The method allows deep penetration into
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