Page 283 - Applied Probability
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12. Models of Recombination
                                                                                            271
                                In the count-location model, inequality (12.15) is equivalent to
                                                                                         (12.16)
                                                            <Q(1 − x 1 )Q(1 − x 2 ),
                                             Q(1 − x 1 − x 2 )
                                          2
                                                       2
                                          λ 1 and x 2 =
                                                        d
                                                       λ 2 are the standardized map lengths of the
                              where x 1 =
                                           d
                              intervals I 1 and I 2 , and Q(s) is the generating function of the total number
                              of chiasmata on the chromatid bundle. It is of some interest to characterize
                              the class C of discrete distributions for the chiasma count N guaranteeing
                              positive interference or at least noninterference. In general, we can say that
                              C
                                (a) is closed under convergence in distribution,
                                (b) is closed under convolution,
                                (c) contains all distributions whose generating functions Q(s) are log-
                                                           2
                                                           d
                                   concave in the sense that  ds 2 ln Q(s) ≤ 0,
                                (d) contains all distributions concentrated on the set {0, 1} or on the set
                                   {1, 2, 3, 4}.
                              Properties (a) and (b) are trivial to deduce. Problems 8 and 9 address
                              properties (c) and (d). Property (d) is particularly relevant because most
                              chromatid bundles carry between one and four chiasmata. From these four
                              properties, we can build up a list of specific members of C. For instance,
                              C contains all binomial distributions and all distributions concentrated on
                              two adjacent integers. Compound Poisson distributions such as the negative
                              binomial exhibit negative interference rather than positive interference.
                                For the stationary renewal model, we allow equality in inequality (12.15)
                              and reexpress it for all y, z ≥ 0as
                                                                 ¯
                                                                      ¯
                                                  ¯
                                                  F ∞ (y + z) ≤ F ∞ (y)F ∞ (z),          (12.17)
                              where the right-tail probability
                                               ¯
                                              F ∞ (x)  =  1 − F ∞ (x)
                                                          1     ∞
                                                      =        [1 − F(w + x)]dw.         (12.18)
                                                          µ
                                                             0
                                              ¯
                              Log-concavity of F ∞ (x) is a sufficient condition for the submultiplicative
                              property (12.17). Indeed, the inequality
                                                         y+z  d
                                        ¯
                                                                ¯
                                     ln F ∞ (y + z)=          ln F ∞ (x)dx
                                                       0   dx
                                                         y                 z
                                                          d                 d
                                                                                 ¯
                                                              ¯
                                                  ≤         ln F ∞ (x)dx +    ln F ∞ (x)dx
                                                       0  dx             0  dx
                                                        ¯
                                                                  ¯
                                                  =ln F ∞ (y)+ln F ∞ (z)
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