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CHAPTER 2






                                   Biosystems Analysis


                                         and Optimization






               Wouter Saeys and Herman Ramon
               Department of Biosystems
               Katholieke Universiteit Leuven, Heverlee, Belgium

               Tom Coen
               INDUCT bvba, Zemst, Belgium



          2.1 Introduction
               Mathematical description of the dynamic behavior of technical sys-
               tems has a long tradition, which first reached a climax in 1687 when
               Isaac Newton introduced his three fundamental laws to describe the
               motion of a point mass. Nevertheless, it was not until the nineteenth
               century before mathematical models were slowly introduced to
               describe biological systems (e.g., population growth model intro-
               duced by Pierre Verhulst in 1837), and it was only in the twentieth
               century that this discipline fully developed. It is expected that the
               twenty-first century will be the age of mathematical biology aiming
               at an accurate mathematical description of the most important bio-
               logical processes (e.g., photosynthesis, respiration, metabolic path-
               ways, tissue generation).

               2.1.1 Definitions

                    •  Systems analysis or systems theory—quantitative (mathematical)
                      analysis of dynamic systems.
                    •  Dynamic system—entity that can be isolated from its environ-
                      ment by a physical or conceptual border and whose state
                      changes over time. Traditional examples of such dynamic sys-
                      tems are machinery (car, train, airplane, etc.), electronic circuits,
                      and chemical processes (reactions, pathways, etc.). However,
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