Page 241 - Color Atlas of Biochemistry
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232       Organelles



             Protein maturation                               tible to proteinases. To protect partly folded
                                                              proteins, there are auxiliary proteins called
             After translation, proteins destined for the     chaperones because they guard immature
             secretory pathway (see p. 228) first have to     proteins against damaging contacts. Chaper-
             fold into their native conformation within the   ones are formed increasingly during tempera-
             rER (see p. 230). During this process they are   ture stress and are therefore also known as
             supported by various auxiliary proteins.         heat-shock proteins (hsp). Several classes of
                                                              hsp are distinguished. Chaperones of the
                                                              hsp70 type (Dna K in bacteria) are common,
             A. Protein folding in the rER
                                                              as are type hsp60 chaperonins (GroEL/ES in
             To prevent incorrect folding of the growing      bacteria). Class hsp90 chaperones have spe-
             protein during protein biosynthesis, chaper-     cial tasks (see p. 378).
             ones (see B) inthe lumenof the rER bind to          While small proteins canoften reachtheir
             the peptide chain and stabilize it until trans-  native conformation without any help (1),
             lation has been completed. Binding protein       larger molecules require hsp70 proteins for
             (BiP) is an important chaperone in the ER.       protection against aggregation which bind as
                Many secretory proteins—e. g., pancreatic     monomers and can dissociate again, depend-
             ribonuclease (RNAse; see p. 74)—contain sev-     ent on ATP (3). By contrast, type hsp60 chap-
             eral disulfide bonds that are only formed ox-    eronins form large, barrel-shaped complexes
             idatively from SH groups after translation.      with 14 subunits in which proteins can fold
             The eight cysteine residues of the RNAse can     independently while shielded from their en-
             in principle form 105 different pairings, but    vironment (4). The function of hsp60 has been
             only the combination of the four disulfide       investigated  in   detail  in  the  bacterial
             bonds shown on p. 75 provides active en-         chaperonin GroEL (right). The barrel has two
             zyme. Incorrect pairings can block further       chambers, which are closed with a lid (GroES)
             foldingorlead tounstableorinsoluble con-         during folding of the guest protein. Driven by
             formations. The enzyme protein disulfide iso-    ATP hydrolysis, the chambers open and close
             merase [1] accelerates the equilibration be-     alternately—i. e., the release of the fully folded
             tween paired andunpairedcysteineresidues,        protein from one chamber is coupled to the
             so that incorrect pairs can be quickly split     uptake of an unfolded peptide in the second
             before the protein finds its final conformation.  chamber.
                Most peptide bonds in proteins take on the
             trans conformation (see p. 66). Only bonds
             with proline residues (–X–Pro–) can be           C. Protein import in mitochondria
             present in both cis and trans forms.             Class hsp70 chaperones are also needed for
                In the protein’s native conformation, every   translocation of nuclear-coded proteins from
             X–Pro bond has to have the correct conforma-     the cytoplasm into the mitochondria (see
             tion (cis or trans). As the uncatalyzed transi-  p. 228). As two membranes have to be
             tion between the two forms is very slow,         crossed to reach the matrix, there are two
             there is a proline cis–trans isomerase [2] in    translocator complexes: TOM (“transport
             the ER that accelerates the conversion.          outer membrane”) and TIM (“transport inner
                                                              membrane”). For transport, proteins are un-
                                                              folded in the cytoplasm and protected by
             B. Chaperones and chaperonins
                                                              hsp70. TOM recognizes the positively charged
             Most proteins fold spontaneously into their      signal sequence at the protein’s N terminus
             native conformation, even in the test tube.      (see p. 228) and with the help of the mem-
             In thecell, wherethere arevery high concen-      brane potential threads the chains through
                                                   –1
             trations of proteins (around 350 g  L ), this    the central pores of the two complexes. Inside
             is more dif cult. In the unfolded state, the     TIM, further hsp70 molecules bind and pull
             apolar regions of the peptide chain (yellow)     the chain completely into the matrix. As with
             tend to aggregate—due to the hydrophobic         import into the ER, the signal peptide is pro-
             effect (see p. 28)—with other proteins or        teolytically removed by a signal peptidase
             with each other to form insoluble products       during translocation.
             (2). In addition, unfolded proteins are suscep-


           Koolman, Color Atlas of Biochemistry, 2nd edition © 2005 Thieme
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