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               150                                                                                   Mass Spectrometry


               processes provides clues to the original structure of the  it encounters will most likely be a methane molecule. The
               molecule. A balance must be attained between fragmenta-  ion/molecule reaction between the two involves a pro-
                                                                                      +
               tion extensive enough to provide reasonable clues to struc-  ton transfer to create CH and CH . Several other sub-

                                                                                      5       3
               ture of the neutral molecule, and a relative intensity of the  sequent reactions occur, and the final distribution of ions
               molecular ion large enough so that the molecular ion can  depends explicitly on the source temperature and pres-
               be identified, and the mass of the sample molecule de-  sure, but the primary reactant ion is usually CH . This
                                                                                                         +
                                                                                                         5
               termined. Determination of molecular mass is a physical  ion acts as a strong gas-phase acid that protonates any-
               measurement, in contrast to the insight and intuition of  thing more basic than methane; neutral sample molecules
               interpretation. The appearance of both M +    and fragment  are sufficiently basic to accept a proton to form the proto-
                                                                                                  +
               ions derived from the molecular ion—the deduction of  nated molecule. The mass of the (M + H) ion reveals the
               both molecular mass and molecular structure—is the core  molecular mass, and the protonated molecule then frag-
               use that has supported the growth of electron ionization  ments in accordance with the amount of internal energy
               mass spectrometry.                                contained within it. Methane is not the only reagent gas
                                                                 that forms a reagent ion that transfers a proton to the gas-
                                                                 phase sample molecule. Isobutane introduced into the CI
                 2. Chemical Ionization                                                                  +
                                                                 source at a pressure of about 1 torr generates C 4 H as an
                                                                                                         9
               In electron ionization, an encounter with an energetic elec-  acidic reagent ion, which also transfers a proton to the neu-
               tron causes the ejection of a single electron from a gas-  tral sample molecule, but gives it less energy so that the
               phase sample molecule M to form the odd-electron molec-  protonated molecule fragments less. Ammonia reacts un-
                                                                                          +
               ular ion M . If too much energy is deposited into M +    der CI conditions to create NH . The ammonium ion can
                        +
                                                                                          4
               during the ionization process, or if the molecule is prone  transfer a proton to the sample molecule, or it can trans-
               to dissociate, fragment ions may be seen in the mass spec-  fer the intact ammonium group to create (M + NH 4 ) .A
                                                                                                           +
               trum, but the M +    may be reduced to such a low inten-  simple rule in CI mass spectrometry is use methane to ob-
               sity that it is indistinguishable above the background sig-  tain the protonated molecule and some fragmentation, and
               nal level. Without the molecular ion, the determination of  then use isobutane when you want to minimize the frag-
               molecular mass is difficult. Chemical ionization (CI) was  mentation and concentrate ion current in the protonated
               developed to overcome this difficulty and provide molec-  molecule (as might be required when low limits of detec-
               ular ions for compounds used for determination of the  tion are sought). Since the ammonium ion will transfer
               molecular mass.                                   its proton only to compounds more basic than ammonia
                 Chemical ionization involves a collision and reaction  itself, selectivity in ionization can be achieved.
               between an ion and a molecule, both in the gas phase. The
               ion is called the reagent ion and the molecule is the neutral
                                                                   3. Electrospray Ionization
               sample molecule. Since the process is an ion/molecule re-
               action, parameters such as source temperature and source  Among the ionization methods discussed here, ESI is
               pressure, sample pressure and reagent gas pressure, and  unique in that it generates ions directly from within a so-
               the presence of impurities in the gas stream that enters  lution that is sprayed from a fine needle at atmospheric
               the source must be carefully controlled. The CI source  pressure. At the core of the ionization source is a stain-
               is a variation of the standard EI source, with modifica-  less steel capillary tube that carries solvent (effluent from
               tions required to achieve a higher source pressure (about  a LC column, typically) at a flow rate of 2–5 µl/min. A
               1 torr) while keeping the mass analyzer pressure within  potential difference of 3000–4000 V is maintained be-
               acceptable limits. The source filament emits electrons, but  tween the needle and a counter electrode, which can be
               these are now accelerated to several hundred volts (250–  a wall of the source, or a skimmer cone with an aperture
               500 eV is typical) compared to the standard 70 eV of  that passes the ions into the mass spectrometer. A spray is
               an EI source. This higher energy allows the electrons to  generated at the tip by the solvent flow emerging at atmo-
               penetrate through the higher gas pressure in the source.  spheric pressure, and the potential difference ensures that
               Since the pressure of 1 torr is mostly the reagent gas (of-  the droplets emerging from the needle are charged, aiding
               ten methane), the electron emitted from the filament is  in their dispersal. A supplemental flow of gas is also some-
               likely to encounter a methane molecule. When it does, an  times used to aid in desolvation of the droplets. The ions
               electron ionization process occurs, viz.          that are within the bulk solvent, or more accurately, those
                                                                 ions that are formed in the droplet as the last evaporation
                   CH 4 + e −  −→ CH  +    + e −  + e −  .
                          filament     4    filament  methane      of neutral solvent molecules occurs, are focused by ion
               TheCH +    iondoesnottravelfarbeforeitencountersaneu-  lenses, and sampled through apertures, to be passed into
                     4
               tral gas molecule, and at 1 torr of methane, the molecule  the mass spectrometer.
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