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 Encyclopedia of Physical Science and Technology  EN002E-79  May 17, 2001  20:28






               356                                                                            Capillary Zone Electrophoresis


               conventional electrophoretic techniques have been dem-  with an electrolyte. A schematic of a CE system is pre-
               onstrated: zone electrophoresis, isotachophoresis, isoelec-  sented  in  Fig.  1.  The  capillary  ends  are  immersed  in
               tric focusing, and sieving separations. Unlike conven-  electrolyte-filled reservoirs containing electrodes con-
               tional electrophoresis, however, the separations are  nected to a high-voltage power supply. A sample is in-
               usually performed in free solution without the require-  troduced at one end of the capillary (the inlet) and ana-
               ment for a casting a gel. As in HPLC, detection is  lytes are separated as they migrate through the capillary
               accomplished as the separation progresses, with resolved  towards the outlet end. As separated components migrate
               zones producing an electronic signal as they migrate past  through a section at the far end of the capillary, they are
               the monitor point of a concentration-sensitive (e.g., ul-  sensed by a detector, and an electronic signal is sent to a
               traviolet absorbance or fluorescence) detector; therefore,  recording device.
               the need for staining and destaining is eliminated. Data  As in conventional gel electrophoresis, the basis of sep-
               presentation and interpretation is also similar to HPLC;  arations in capillary electrophoresis is differential migra-
               the output (peaks on a baseline) can be displayed as an  tion of analytes in an applied electric field. The elec-
               electropherogram and integrated to produce quantitative  trophoretic migration velocity ν EP (in units of cm/sec)
               information in the form of peak area or height. In most  will depend upon the magnitude of the electric field, E,
               commercial CE instruments, a single sample is injected  and electrophoretic mobility, µ EP , of the analyte:
               at the inlet of the capillary and multiple samples are
                                                                                   ν EP = µ EP E             (1)
               analyzed in serial fashion. This contrasts to conventional
               electrophoresis in which multiple samples are frequently  In a medium of a given pH, mobility of an analyte is given
               run in parallel as lanes on the same gel. This limitation  by the expression:
               of CE in sample throughput is mitigated by the ability
                                                                                  µ EP = q/6πηr              (2)
               to process samples automatically using an autosampler.
               Several multicapillary systems have been introduced to  where q is the net charge of the analyte, η is the vis-
               increase sample throughput; most of these are designed  cosity of the medium, and r is the Stoke’s radius of the
               specifically for high-throughput DNA sequencing.   analyte. Since the Stoke’s radius is related to molecular
                 Compared to its elder cousins, CE is characterized  mass and therefore to frictional drag, mobility will in-
               by high resolving power, sometimes higher than elec-  crease inversely with molecular weight and directly with
                                                                                                  2
               trophoresis or HPLC. The use of narrow-bore capillar-  increasing charge. Mobility in units of cm sec −1  V −1  can
               ies with excellent heat-dissipation properties enables the  be determined from the migration time and field strength
               use  of  very  high  field  strengths  (sometimes  in  excess  by:
               of 1000 volts/centimeter), which decreases analysis time
                                                                                µ EP = (I/t)(L/V )           (3)
               and minimizes band diffusion. When separations are per-
               formed in the presence of electroosmotic flow (EOF), the  where I is the distance from the inlet to the detection
               plug-flow characteristics of EOF also contribute to high  point (termed the effective length of the capillary), t is the
               efficiency. In contrast, the laminar flow properties of liq-  time required for the analyte to reach the detection point
               uid chromatography increase resistance to mass transfer,  (migration time), L is the total length of the capillary, and
               reducing separation efficiency.                    V is the applied voltage.
                 Because of its many advantages, CE is finding increas-  In contrast to most forms of gel electrophoresis, the ve-
               ing use as a tool in analytical chemistry. In some cases it  locity of an analyte in capillary electrophoresis will also
               may replace HPLC and electrophoresis, but more often it  depend upon the rate of electroosmotic flow. This phe-
               is used in conjunction with existing techniques, providing  nomenon is observed when an electric field is applied to
               a different separation selectivity, improved quantitation,  a solution contained in a capillary with fixed charges on
               or automated analysis. It was the adaptation of CE tech-  the capillary wall. Typically, charged sites are created by
               nology in the design of 96-channel DNA sequencers that  ionization of silanol (SiOH) groups on the inner surface
               enabled a draft of the human genome sequence to be com-  of the fused silica. Silanols are weakly acidic and ionize
               pleted in less than two years.                    at pH values above about 3. Hydrated cations in solution
                                                                 associate with ionized SiO groups to form an electrical
                                                                                       −
                                                                 double layer: a static inner Stern layer close to the surface
               I.  PRINCIPLES OF CAPILLARY                       and a mobile outer layer known as the Helmholtz plane.
                 ELECTROPHORESIS                                 Upon application of the field, hydrated cations in the outer
                                                                 layer move toward the cathode, creating a net flow of the
               As the name implies, capillary electrophoresis separates  bulk liquid in the capillary in the same direction (Fig. 2).
               species within the lumen of a small-bore capillary filled  The rate of movement is dependent upon the field strength
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