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15







            MOLECULAR SIMULATION OF GAS ADSORPTION
            IN MINERALS AND COAL: IMPLICATIONS FOR GAS
            OCCURRENCE IN SHALE GAS RESERVOIRS




            Keyu Liu , Shuichang Zhang , Shaobo Liu  and Hua Tian         1
                      1,2
                                                          1
                                            1
            1  PetroChina Research Institute of Petroleum Exploration and Development, Beijing, China
            2  CSIRO Division of Earth Science and Resource Engineering, Perth, WA, Australia


            15.1  INTRODUCTION
                                                                   The natural systems usually consist of a vast number of
                                                                 particles. It is impossible to find properties of such complex
            15.1.1  Molecular Dynamics Simulation
                                                                 systems analytically. MD circumvents this problem by using
            Molecular simulation (MS) includes molecular dynamics (MD)   numerical methods. It has been widely used as a useful
            and Monte Carlo (MC) simulations. MD simulation (Allen   predictive tool for new materials without synthesizing them
            and Tildesley, 1989; Frenkel and Smit, 1996; Sadus, 1999) is   and for virtual experiments to provide an insight into rela­
            based on the principles of Newtonian mechanics. It simulates   tionship between microstructures and macrothermodynamic,
            physical movements of interacting atoms and molecules in a   elastic, dielectric and transport properties under some extreme
            complicated and complex system. The trajectories of atoms   conditions, where experiments are impractical or impossible.
            and molecules are determined by numerically solving the   MD serves as a bridge between the microscopic and the
            Newton’s equations of motion, where forces between the   macroscopic realms and a bridge between theoretical and
            atoms  and  molecules  are  defined  by  molecular  mechanics   experimental work.  Testing agreement between theory
            force fields. Thermodynamic, structural, and transport prop­  and simulations allows theory to be refined and comparing
            erties, such as potential energy, radial distribution function     simulation experiment results to be extrapolated.
            (RDF), and diffusion coefficient are derived from the trajec­  Advantages of MD over experiments lie in the possibility
            tories of a system according to the principle of statistical   of obtaining detailed time evolution of a system and allow­
            mechanics. MS can also be performed in the grand canonical   ing the information on the dynamics of the system and the
            statistical ensemble (GCMC) (Zhang et al., 2014a).   atomic processes to be fully presented, which otherwise
              The basic procedure of MD simulation includes (i) cre­  might be difficult or impossible to realize in the laboratory.
            ating a system including hundreds and thousands of atoms   It can solve problems with many degrees of freedom and
            and molecules, (ii) applying the law of classical Newtonian   under a variety of initial and external conditions.
            mechanics to all the particles in the system, (iii) solving the   The disadvantage of MD is that the reliability of the cal­
            coupled Newtonian’s equations of motion numerically and   culations depends on the quality of the employed interaction
            obtaining coordinates and velocities and each particle by   model, as the construction of the model always involves
            integration, (iv) updating the positions and velocities of   compromises between accuracy and speed of calculation. It
            the  particles and recording the trajectories and velocities   has its intrinsic time and length scale problem, where simu­
            of the particles for every instant of time, and (v) computing   lation size is at nanoscale level with simulation durations
            properties of interest. The MD simulation workflow is shown   being typically no more than hundreds of nanoseconds.
            in Figure 15.1.                                      Nowadays, MD has been developed into an extremely  useful,



            Fundamentals of Gas Shale Reservoirs, First Edition. Edited by Reza Rezaee.
            © 2015 John Wiley & Sons, Inc. Published 2015 by John Wiley & Sons, Inc.
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