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crystal faces (cf. Section 4.1.4).
  Dynamic  measurements  are  likely  to  become  of  increasing  importance  as  process  as  well  as  structure  also  falls  under  the  scrutiny  of  the
  metrologist. In situ techniques are required here; rastering is also to be avoided.
  Metrology  of  the  nano/bio  interface  presents  challenges  of  immense  complexity,  often  requiring  completely  different  approaches  from  those
  developed for wholly inanimate systems.
  Although the functional characterization of nanodevices (device performance) could be legitimately included under nanometrology, it is really too
  vast and varied a field; selected aspects are considered in Chapter 7 and Chapter 10.
  5.1. Topography
  Methods can be divided into “contact” and “noncontact”. Microscopically, there is little ambiguity about the notion of contact but in the nanoscale
  one is aware that the Born repulsion prevents atoms from moving arbitrarily close to each other. Hence, although the atomic force microscope
  (AFM)—Section 5.1.1—is often considered to be a miniature, nanoscale stylus scanned over a sample the repulsion between the atoms of the
  AFM tip and sample asperity is actually action at a distance, hence the method could equally well be classified as noncontact. Scanning near-field
  optical microscopy (SNOM), although usually grouped with AFM because the instrumentation is very similar, uses a “light (optical) stylus”, for which
  the notion of contact with the sample is even more tenuous.

  5.1.1. Contact Methods

  Stylus-based profilers have long been used by engineers to determine the surface roughness of objects. A sharp-pointed stylus equipped with
  some means of determining its vertical displacement is simply dragged over the surface perpendicular to the surface plane. The vertical motions
  (deflexions from a mean) of the stylus are considered to more or less faithfully mimic the surface topography, which is recorded through a position
  transducer  attached  to  the  stylus.  This  device  was  being  progressively  miniaturized,  and  the  ability  to  determine  subnanometer  vertical
  displacement was achieved for the first time by the Topografiner, invented by scientists at the US National Standards Institute [173] This nanoscale
  vertical resolution was achieved using the electron tunneling effect, a quantum phenomenon (given the existence of two levels having the same
  energy,  there  is  a  finite  probability  for  an  electron  occupying  one  of  the  energy  levels  to  pass  to  the  other  one  (if  unoccupied),  depending
  exponentially on the spacial distance separating the levels). The current measured between an electrically conducting stylus and an electrically
  conducting sample can therefore be converted into sample topography.

  Another indispensable technological advance was the perfection of piezoelectric motion controllers in the (x, y) plane (i.e., that of the surface) and
  in  the z direction (perpendicular to the surface). The stylus could then be raster-scanned very close to the surface. A feedback circuit can be
  arranged  to  appropriately  adjust  the z displacement required to keep the tunneling current constant. The perfected instrument was called the
  scanning tunneling microscope (STM) [21]. The principle, of miniature styli moving over the sample surface and at each position returning some
  information about topography, or friction, or chemical nature, etc., has meanwhile been vastly extended to cover dozens of different scanning probe
  microscopies (SPM), as the family is called. The most important (in the sense of being the most widely used) is called the atomic force microscope
  (Figure 5.1).
















  Figure 5.1 The atomic force microscope. The sample S is mounted on the platform P, in relation to which the block B can be moved in the x, y plane (parallel to the surface of S) and z direction (perpendicular to the surface of S). A
  flexible cantilever C is mounted on the block, and on the end of the cantilever is a sharp tip T. In order to record the vertical displacement of the tip as a result of the asperity of S, the beam from a diode laser L is reflected off the
  cantilever onto a split photodiode I. The tip is scanned across the sample (i.e., in the x, y plane) while remaining almost in contact with it; sample asperity displaces the tip vertically, and the corresponding deflexions of the cantilever are
  faithfully recorded as the ratio of the signals from the two halves of the photodiode, from which sophisticated signal processing allows the three-dimensional topography of the surface to be extracted. A quadruply split photodiode enables
  sideways deflexions of the cantilever due to friction to be recorded as well.
  It is a considerable advantage over electron microscopy that many probes can operate in air at atmospheric pressure, and even in liquids. On the
  other hand, the forces applied to the sample features are relatively large, and unless extreme care is taken may distort or even destroy the sample
  during imaging. Furthermore, the presence of liquid (even thin films of water coating the sample surface and scanning tip) gives rise to capillary
  forces, which may, for example, pull the tip towards the sample surface (Section 3.3; cf. Figure 3.1). The technique is, however, being continuously
  improved. An important innovation has been the introduction of “tapping mode”, in which the cantilever oscillates vertically, thereby minimizing
  contact of the tip with the sample, and permitting the use of lock-in amplification to reduce noise.

  AFM Resolution
  The vertical resolution is limited only by the piezoelectric crystal that moves the sample relative to the tip, and the arrangement for detecting
  cantilever deflexion. An important consideration is that for the finest nanotexture, such as that mimicking a protein surface, the lateral features
  would be smaller than the 30 to 40 nanometer radius of the typical stylus of an SPmml: current technology is able to routinely mass produce silicon
  or silicon nitride tips with radius R equal to a few tens of nanometers. Hence, in the image generated by the microscope the apparent lateral
  dimensions of features will be broadened (see, e.g., [150]). If r is the true feature radius, the apparent lateral dimension L of an object imaged by a
  tip of radius R is given by


                                                                                                                       (5.1)
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