Page 183 - Macromolecular Crystallography
P. 183

172  MACROMOLECULAR CRYS TALLOGRAPHY

        Ritter, H., Martinetz, T. and Schulten, K. (1992). Neural  Terwilliger, T. C. and Berendzen, J. (1999). Automated
          Computations and Self-Organized Maps: An Introduction.  MAD and MIR structure solution. Acta Crystallogr. D 55,
          Addison-Wesley.                             849–61.
        Skubak, P., Murshudov, G.N. and Pannu, N.S. (2004)  Theodoridis, S. and Koutroumbas, K. (2006). Pattern
          Direct incorporation of experimental phase information  Recognition. Academic Press, London.
          in model refinement. Acta Crystallogr. D60, 2196–2201.  Tronrud, D. E. (2004). Introduction to macromolecular
        Sheldrick, G. M. and Schneider, T. R. (1997). SHELXL:  refinement. Acta Crystallogr. D 60, 2156–2168.
          High-resolution refinement.  Method Enzymol.  277,  Tronrud, D. E., Ten Eyck, L. F. and Matthews, B. W. (1987).
          319–343.                                    An efficient general-purpose least-squares refinement
        Swanson, S. M. (1994). Core tracing: depicting connections  program for macromolecular structures. Acta Crystallogr.
          between features in electron density. Acta Crystallogr. D  A 43, 489–501.
          50, 695–708.                               Turkenburg, J. P. and Dodson, E. J. (1996). Modern devel-
        Terwilliger, T. (2004). SOLVE and RESOLVE: automated  opments in molecular replacement. Curr. Opin. Struct.
          structure solution, density modification and model  Biol. 6, 604–610.
          building. J. Synchr. Rad. 11, 49–52.       Weeks, C. M., Shah, N., Green, M. L., Miller, R. and
        Terwilliger, T. C. (2001). Map-likelihood phasing. Acta  Furey, W. (2005). Automated web- and grid-based pro-
          Crystallogr. D 57, 1763–1775.               tein phasing with BnP. Acta Crystallogr. A 61 (Suppl.),
        Terwilliger, T. C. (2003a). Automated main-chain model  C152.
          building by template matching and iterative fragment  Weichenrieder, O., Repanas, K. and Perrakis, A. (2004)
          extension. Acta Crystallogr. D 59, 38–44.   Crystal structure of the targeting endonuclease of the
        Terwilliger, T. C. (2003b). Automated side-chain model  human LINE-1 retrotransposon. Structure 12, 975–986.
          building and sequence assignment by template match-  Winn, M.D., Murshudov, G.N. and Papiz, M.Z. (2003)
          ing. Acta Crystallogr. D 59, 45–49.         Macromolecular TLS refinement in REFMAC at moder-
        Terwilliger, T. C. (2003c). Improving macromolecular  ate resolutions. Methods Enzymol. 374, 300–321.
          atomic models at moderate resolution by automated  Zwart, P. H., Langer, G. G. and Lamzin, V. S. (2004).
          iterative model building, statistical density modification  Modelling bound ligands in protein crystal structures.
          and refinement. Acta Crystallogr. D 59, 1174–1182.  Acta Crystallogr. D 60, 2230–2239.
   178   179   180   181   182   183   184   185   186   187   188