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4.2 NANOPARTICLES ARRANGED STRUCTURES                                        FUNDAMENTALS
                  biomineralization and the mild synthesis condition, “at  Phage display method is a combinatorial chem-
                  room temperature in neutral solution”, attracts immense  istry, in which a molecule with desired function is
                  interest in the hybridization with heat-labile or pH-  selected by screening from a great diversity of
                  sensitive organic compounds. Here, we show you recent  molecular population called library.  The problems
                  biomineralization studies by combinatorial procedure.  for the combinatorial library approach are how to
                                                                 make library, how to screen desired molecule, and
                                                                 how to analyze the selected low-concentrated mole-
                    4.2.2.1 Functional biomolecules: Peptide and protein
                                                                 cule. In the case that peptide/protein is an element in
                  In general, peptide and protein play an important role  library, the use of a kind of virus, phage, can solve
                  on biomineralization, as a framework and catalyst.  the problems.
                  Peptide/protein is a polymer produced by the polycon-  Bacteriophage M13 used in phage display method, is
                  densation of amino acids, and its complicated steric  made of five kinds of coat proteins (gp III, gp VI, gp
                  structure and function depend solely on the order of  VII, gp VIII, and gp IX), and gp III functions to infect
                  amino acids (Fig. 4.2.7). Considering that there are  host Escherichia (E.) coli (Fig. 4.2.8). A peptide or pro-
                  20 kinds of amino acids, the combination number of  tein is displayed at the N-terminus of gp III, and the
                  amino acids order is numerous. Living organisms can
                  respond to diverse environmental changes by combi-
                  natorial evolution of peptides and proteins utilizing the
                  numerous combination number of amino acids order.         Single chain DNA
                  Typical functions of peptides and proteins are specific
                  binding ability (e.g. antibody), catalysis (e.g. enzyme),
                  and “forming” ability (e.g. collagen). These functions         Gene information
                  are considered to be necessary for biomineralization.          of displayed peptide
                  Shimizu et al. focused on the silica synthesized by
                  marine sponge, and identified the protein used for
                  silica synthesis, called silicatein [3]. Silicatein can              pVIII coat protein
                  hydrolyze tetraethoxysilane in neutral solution to
                  make silica in vitro. The silica synthesis by peptide/
                  protein is called “silicon biotechnology” [4], which is
                  expected for a novel silicon synthesis.                                      gIII coat protein

                    4.2.2.2 Phage display
                  In nature, there are peptides and proteins that bind
                  and synthesize inorganic materials, such as sili-
                  catein. However, their identification from in vivo not
                  only takes a long time and is inefficient, but also is
                  logically hard to find the peptide/protein for non-
                  biological materials. Recently, the peptides and pro-
                  teins with affinity for non-biological inorganic
                  materials have been discovered by means of a com-                           Displayed peptide
                  binatorial library approach. Here, we show you a  Figure 4.2.8
                  method using phage.                            Bacteriophage M13.


                          O               O                     O         O
                                                          H         H         H
                   H 2 N  CH  C  OH  H 2 N  CH  C  OH  •      •      •    N  CH  C  N  CH  C  N  •      •      •
                       CH 2            CH 2                  CH 2      CH 2
                       C  O                                  C  O
                       NH 2                                  NH 2
                                                                    HN
                                    HN
                       Amino acids                         Polymerization                    Express
                                                                                             function

                  Figure 4.2.7
                  From amino acids to peptide/protein.

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