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Luminescent Conjugated Polymers for Staining and Characterization of Amyloid Deposits   343

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               normal soluble prion protein PrP .  It has also been found that intra-
               venous injection or oral administration of preformed fibrils from dif-
               ferent sources can result in accelerated amyloidosis through a prionlike
               mechanism. 97, 98  Hence, an environment enriched with fibrillar mate-
               rial could act as a risk factor for amyloid diseases. In addition, prions
               can occur as multiple strains, giving rise to different symptoms and
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               incubation periods.  The prion strain phenomenon is believed to be
               associated with multiple morphologies of the prion aggregates, and
               the specific properties of a prion strain are encoded in the tertiary or
               quaternary structure of the aggregates.
                   The presence of highly organized and stable fibrillar deposits,
               amyloid plaques, in the organs of patients suffering from protein
               deposition diseases led initially to the reasonable postulate that this
               material is the causative agent of the various disorders. However, as
               mentioned in Sec. 9.3.2, more recent findings have raised the possibil-
               ity that precursors to amyloid fibrils, such as low-molecular-weight
               oligomers and/or structured protofibrils, are the real pathogenic species,
               at least in neurodegenerative diseases. For instance, the severity of cog-
               nitive impairment in Alzheimer’s disease (AD) correlates with the levels
               of low-molecular-weight species of aggregated  A-beta peptide (Aβ),
               including small oligomers, rather than with the amyloid burden. 99
               Genetic evidence also supports the theory that the precursor aggregates
               are the pathogenic species. As seen from in vitro experiments, the intro-
               duction of an aggressive mutation in the protein favors the formation of
               prefibrillar states, and this mutation is associated with a heritable early
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               onset of Alzheimer’s disease.  In addition, the most highly infective
               form of the mammalian prion protein has been identified as an oligomer
               of about 20 molecules, indicating that such small aggregates are the most
               effective initiators of transmissible spongiform encephalopathies. 101

               9.3.3  Methods for Detection and Structural
                       Characterization of Amyloid Fibrils
               The formation and presence of amyloid fibrils or amyloid plaques
               can be visualized by small amyloid ligands dyes, such as derivatives
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               of Congo red and thioflavins.  These dyes bind selectively to protein
               aggregates having an extensive cross β-pleated sheet conformation
               and sufficient structural regularity. Hence, the presence of mature
               amyloid fibrils is easily detected by these dyes, seen as an enhanced
               fluorescence (thioflavins) or green-yellow birefringence under cross-
               polarized light (Congo red) from the dye. However, these dyes are
               not able to recognize prefibrillar species, and amyloid fibrils of
               diverse morphological origin, as seen for prion strains, cannot be
               separated.  Furthermore, amyloid ligands are not selective for a dis-
               tinct protein and cannot differentiate between amyloid subtypes. The
               classification of amyloid subtypes is made by immunohistochemical
               stains utilizing antibodies that are selective for the peptide/protein
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