Page 78 - Thermodynamics of Biochemical Reactions
P. 78

4.9 Effect of Temperature on Transformed  Thermodynamic Properties   73


         P, pH, and (', and so

                                                                         (4.8-9)



                                                                        (4.8 - 1 0)

         Thus the effect of pH on the binding of  magnesium  ions by a reactant is equal to
         the effect of pMg on the binding of  hydrogen ions. The effect of  pH on the change
         in binding  of  magnesium  ions in a  biochemical  reaction  is equal to the effect of
         pH on the  binding  of  magnesium  ions. Thus the  binding  of  H+ and  Mg2+ are
         linked.


         H  4.9  EFFECT OF TEMPERATURE ON TRANSFORMED
                  THERMODYNAMIC PROPERTIES

         The effect of  temperature  on standard transformed  thermodynamic  properties  of
         species  has  been  discussed  in  the  preceding  chapter  on  the  assumption  that
         A,HO(Z = 0)  for  species  are  independent  of  temperature,  or  in  other  words,
           0
         C,,  = 0. In order to make calculations at finite ionic strengths, it is necessary  to
         adjust  the  Debye-Huckel  coefficient  CI  and the  coefficients of  the ionic  strength
         terms in the equations for adjusting A,Go and A,Ho for the effect of pH and ionic
         strength. As discussed  in Section 3.7, Clarke and Glew (1980) gave values of  the
         various coefficients at a series of temperatures. But  in order to make calculations
         at arbitrary temperatures, it is necessary to fit SI  to an empirical equation, such as
         3.7-3. The effects of temperature on A,G"  and A,H"  for biochemical reactants at
         specified pH and ionic strength can be calculated  by calculating these effects for
         the species involved by use of equation  3.7-2. Alberty (2001d) calculated  standard
         A,GO  and  A,HO values  for  22  species  of  biochemical  interest  at  283.15  and
         313.15K and went  on to calculate  A,G"  and A,H"  at pH 7 and ionic strength
         0.25  M  for  the  corresponding  reactants.  This  made  it  possible  to  calculate
         apparent  equilibrium  constants  for  six  biochemical  reactions  at  283.15  and
         313.15 K.  Mathenzatica  programs  (calcdGTsp  and  calcdHTsp)  were  written  to
         calculate  A,G"  and  A,H"  of  species  at  arbitrary temperatures,  pHs,  and  ionic
         strengths. In the second program, the standard transformed enthalpies of species
         are calculated  using the Gibbs-Helmholtz  equation.  A  biochemical reactant  that
         consists  of  two  or  more  species,  A,G"  and  A,H"  can  be  calculated  for  the
         pseudoisomer  group in the usual way, but one must be careful to change the RT
         factor  in  the  program  for  A,G"(iso).  When  standard  enthalpies  of  all  of  the
         species  involved  in  a  reaction  are  available,  K'  can  be  calculated  at  desired
         temperatures not too far from 298.15 K. The effect of temperature on the standard
         transformed  Gibbs  energy  of  hydrolysis  of  ATP  is  shown  in  Table  4.1  (see
         Problem 4.6).
             This discussion has not  included the more accurate calculations  that can be
         made when C:  values of species are known (see equation 3.5-18). These values are
         not  known  for many  species of  biochemical interest. The effects of  heat capacity
         terms  are  discussed  in  Chapter  10 because  the  existing  information  on  Arc;'
         comes primarily from calorimetric data. In principle, Ar Cp can be calculated from
         measurements  of  apparent equilibrium  constants  over  a range  of  temperatures.
         Over short ranges of  temperature,  K'  can be represented  by

                                                 Ar H'O
                                  RlnK'=A,S''--                          (4.9- 1)
                                                   T
         But over wider ranges of temperature, ArS0 and A,Ho are functions of tempera-
         ture. Clarke and Glew (1966) have used  Taylor series expansions of  the enthalpy
   73   74   75   76   77   78   79   80   81   82   83