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72    Cha pte r  T h ree


        single prostate cancer cells with synchrotron (SR)-based FTIR micro-
        spectroscopy. The cells were cultured directly onto MirrIR reflection
        substrates for transflection mode analysis. Firstly, the cells were fixed
        in 4 percent formalin (in PBS) for 20 minutes at room temperature
        with a brief rinse in doubly deionized water (3 seconds) before being
        air-dried. Water rinsing was found to be an important step for remov-
        ing residual PBS from the surface of the cells so that a clear distinction
        could be made between the nuclear and cytoplasmic compartments
        (Fig. 3.5a and 3.5b). This also reduces light-scattering artifact during
        analysis. Although tryplan blue staining of these cells demonstrated
        loss of plasma membrane integrity, which is likely to be due to the
        1 percent methanol present in the fixative, SR-FTIR images (col-
        lected  with 7  × 7  μm sampling-aperture-size and 3  μm step-size)
        revealed localizations of lipid [v (C=O)] and phosphate [v (PO )]
                                     s                      as  2
        domains (Fig. 3.5c). Localization of lipid to the cytoplasm was
        expected due to the high concentration of cytoplasmic organelles
        comprising lipid-rich membranes. Whereas, the most intense phos-
        phate signal was expected to localize at the nucleolus of the nucleus
        due to the high concentration of phosphates constituting the backbone



         (a)             (d)  1.0  Formalin
                            Absorbance  0.6
                             0.8
                             0.4
                             0.2
                             0.0
                                 3000  2900  2800 18001600 1400 1200 1000 800
                                  Cytoplasm Spectrum
         (b)                0.25  Formalin Substracted Cytoplasm
                            Absorbance  0.15
                            0.20
                                  Spectrum
                            0.10
                            0.05
                            0.00
                               3000 2950 2900  2850 2800  1800 1500 1400 1200 1000
                                          Wavenumber (cm –1 )
         (c)   Nucleus     Lipid (C = O)      Phosphate        High
                         30                  30
         27              25                  25
         21              20                  20
         15              15                  15
          9  N           10                  10
          3               5                  5
           3 9 15 21 27 33 39 45 51 57  0    0
                           0  10  20 30  40 50  60  0  10  20 30  40 50  60  Low
                μm                μm                 μm
        FIGURE 3.5  Photomicrographs of formalin-fi xed prostate cancer cells (same
        magnifi cation) (a) without subsequent rinsing in deionized water and (b) with
        3-second rinse in deionized water to remove residue PBS from the surface of
        the cells. Scale bar in all photomicrographs = 50 μm. (c) Optical image of a
        single, formalin-fi xed, PC-3 cell. The cells nucleus and nucleolus (N) are
        identifi ed. SR-FTIR images depicting the intensity profi les of lipid ester
                            −1
        ν (C=O) (1752 to 1722 cm  peak area and phosphate ν (PO ) (1280 to
         s                                         as  2
               −1
        1174 cm  peak area). (d) The FTIR spectrum of formalin and overlay of the
        FTIR spectrum of the cytoplasm with the same spectrum processed to
        remove their theoretical formalin content. (Reproduced from Ref. 38.)
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