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24  Chapter 1 Multi-scale models of the heart for patient-specific simulations




                                         The Rice model [123] is commonly used in recent simulation stud-
                                         ies. It has been further augmented with metabolic and energetic
                                         considerations [124]. This type of models captures most of the
                                         known cellular and molecular mechanisms involved in myofila-
                                         ment function, from the CICR mechanisms to troponin function
                                         and ion binding to force generation. These models can comprise
                                         more than 40 ordinary differential equations that need to be in-
                                         tegrated. Scaling up these models at the organ level is therefore
                                         challenging and computationally demanding (40+ equations per
                                         mesh node), although not impossible [123,125], provided they are
                                         coupled with an electrophysiology model that can calculate di-
                                         rectly the intra-cellular Ca 2+  concentration. Nonetheless, the very
                                         large number of free parameters (40+) and their direct link to ionic
                                         and molecular properties make these models difficult, if not im-
                                         possible, to personalize from standard of care clinical data.

                                         Phenomenological models
                                            The idea behind phenomenological models is to provide an
                                         integrated description of the biological mechanisms from the my-
                                         ofilaments to the organ [103,126]. The transition from one spatio-
                                         temporal scale to another is achieved mathematically, using mean
                                         field theory for instance [103], ultimately resulting in a set of sim-
                                         plified equations that are controlled by fewer parameters (usually
                                         four to five parameters). Sermesant et al. [45] proposed a simpli-
                                         fied version of these models, with analytical integration for model-
                                         based image analysis. A multi-scale model that also considers en-
                                         ergy exchange during the heart beat was then proposed in [103],
                                         to ensure the balance between oxygen supply and energy con-
                                         sumption. Details of a phenomenological model used for patient-
                                         specific simulations are given in section 2.3.2.

                                         Lumped models
                                            Lumped models are analytical models of the fiber contraction
                                         that do not consider spatial variability – therefore not requiring
                                         3D meshes to be solved. They focus on an averaged myocyte re-
                                         sponse, with a small number of bulk response laws characteriz-
                                         ing the contraction [127]. These models can be solved very effi-
                                         ciently but they cannot capture regional abnormalities of the my-
                                         ocardium in patients, like scars or localized fibrosis for instance.
                                         As the research community focuses more on patient-specific sim-
                                         ulations, lumped models regained interest for their computa-
                                         tional efficiency. In particular, hyper-reduced models have been
                                         developed as surrogates of more complex 3D models, in order to
                                         achieve fast model personalization [128,129].
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