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32  Chapter 1 Multi-scale models of the heart for patient-specific simulations




                                         When the valves are closed, or the flow is regurgitant, the ap-
                                         propriate sign change for the flow must be enforced, along with
                                         a possible update to the resistance and compliance parameters
                                         – corresponding to a “depleting” rather than a “filling” reservoir
                                         model. These simple ODEs are easily integrated using for example
                                         first-order (Euler) methods.

                                         Atrium model
                                            Atrium contraction, which happens just after diastasis and
                                         before systole, optimizes ventricular filling. Because simulating
                                         atrial contraction explicitly in 3D may be computationally de-
                                         manding, a common approach is to rely on lumped models that
                                         mimic the raise of ventricular pressure due to atrial contraction.
                                         While some simplified models consider atrial pressure constant,
                                         a common strategy consists in using phenomenological models
                                         of atrial pressure based on sigmoid functions, e.g. [45]. More pre-
                                         dictive elastance models have also been proposed to capture the
                                         interactions between atrial volume, pressure, tissue stiffness and
                                         circulatory system [133].
                                            Atrial contraction can be modeled using a lumped time-varying
                                         elastance model. For both atria, the pressure is computed accord-
                                         ing to the equation (for left atrium LA, with similar equations for
                                         the right atrium):

                                                           p LA = E LA (V LA − V LA,rest ),

                                         where the elastance E LA and the rest volume V LA are:


                                                     E LA = y a (E LA,max − E LA,min ) + E LA,min ,
                                                     V LA = (1 − y a )(V LA,rd − V LA,rs ) + V LA,rs .

                                         In these equations, E LA,max , E LA,min , V LA,rd and V LA,rs are free
                                         parameters of the model (maximum and minimum elastance, di-
                                         astolic and systolic volumes at zero pressure respectively). Mini-
                                         mum and maximum elastance parameters enable to set the peak
                                         systolic and diastolic stiffness, which then controls atrial pressure
                                         based on the current volume.
                                            A simple model of atrial activation enables controlling atrial
                                         volume. The activation function y a is defined by


                                                    0.5 [1 − cos(2πt atrium /t twitch )],  if t atrium <t twitch
                                              y a =
                                                    0,                          if t atrium >t twitch
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