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Computer modeling of interaction between a hydrate surface and an inhibitor   319

























            FIG. 10.74  Histogram distributions of adsorption energy during the simulation for different monomers on sII
            {111} slice of hydrate (surfaces at 8 Å and 13 Å from origin).


            TABLE 10.16  Averaged results of docking study on {111} face of sII hydrate.
                         Chemical                           E adsorption (kcal/  Preferred site of
            Monomer      structure  Polymer IUPAC name      mol) average value  adsorption
                                                                                       12 4
            PVCap                  Poly(1-vinyl-azepan-2-one)  −16.31       Near an open 5 6  cage
                                                                                       12 4
            PVP                    Poly(1-vinyl-pyrrolidin-2-one)  −16.39   Near an open 5 6  cage

                                                                                       12 4
            PVA                    Poly(vinyl-alcohol)      −11.0           Near an open 5 6  cage
                                                                                          12
            #1                     Poly(1-vinyl-piperidin-4-one)  −20.87    Near a completed 5
                                                                            cage

                                                                                       12
            #3                     Poly(1-acryloyl-piperidin-4-one)  −17.54  Near an open 5  cage
                                                                                       12
            PAM                    Poly(acrylamide)         −14.99          Near an open 5  cage

                                                                                       12
            Succinimide            Poly(1-vinyl-pyrrolidine-2,5-dione) −14.68  Near an open 5  cage


            done with PVCap. The work reported by Rodger was done using both commercial software
                          2
            packages Cerius  and MOPAC, and non-commercial code. A more recent work from the same
            group (Carver et al., 1996) also reported that a monomer of PVP can adsorb with its pendant
            group or with its backbone part in a partially completed hydrate cavities. However, in their
            work the authors didn't discard the runs where the monomer entered the hydrate cavity with
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