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8   I / AFFINITY SEPARATION / Derivatization


           sensitivity are maximized. In contrast, for preparative  used to determine degradation of the target protein
           and process applications, the objective is to maximize  (for example deamidated and oxidized elements); to
           purity, yield and economy. These techniques have  identify previously unidentiRed components; to estab-
           developed separately, simply because biological mac-  lish the chromatographic identity between recom-
           romolecules  pose  unique  difRculties,  making  binant and natural materials; to develop orthogonal
           them unsuitable for ‘standardized’ analysis. A major  methods for the identiRcation of unresolved impu-
           inSuence on this division has been that scale-up usu-  rities; and for many other demanding analytical
           ally occurs very much earlier in the development of  approaches.
           a process, causing biochemists to turn to the tradi-
           tional low performance methods of ion exchange  Af\nity versus Traditional Media
           (IE), hydrophobic interaction (HI) and gel per-
           meation chromatography (GPC). The highly efR-   When projects are transferred from research to devel-
           cient afRnity chromatography method was gener-  opment two sets of chromatographic techniques are
           ally ignored, primarily because of the difRculty of  carried forward: analysis, usually based on RP-
           having to develop a unique ligand for each separation  HPLC; and larger scale serialized separation steps,
           rather than having ‘off-the shelf’ column pack-  often incorporating traditional methods of ion ex-
           ings immediately available from external suppliers.  change, hydrophobic interaction and gel permeation
           For analytical purposes high performance afRnity  chromatography. Major decisions have to be taken at
           liquid chromatography (HPALC) is a rarity, a func-  this juncture } to scale up the separation processes
           tion of the limited availability of suitable matrices  developed during the research phase or to investigate
           (Table 2) and the afRnity process itself.       alternatives. Regulatory demand and shortened pat-
             Where quantiRable high speed chromatography is  ent lifetimes compel managements to ‘fast track’ new
           required, reversed-phase HPLC (RP-HPLC) has no  products. Commercial pressure is at a maximum.
           equal. Unfortunately there is no general purpose  Being Rrst to market has the highest priority in terms
           method for biomolecules to parallel the inherent  of technical and commercial reward. Very little time
           power of RP-HPLC. The success of RP-HPLC for    is left to explore other separation strategies. It is
           analysis can be judged from the large number of  known that serial application of IE, HI and GPC
           published applications developed for the ‘Rrst wave’  inevitably leads to very high manufacturing costs,
           of protein pharmaceuticals manufactured by geneti-  but which comes Rrst? Most often the decision is
           cally engineered microorganisms. These extracellular  taken to begin manufacture using unoptimized separ-
           (relatively) low molecular weight proteins include  ations as deRned in research reports. It is only in
           human insulin, human growth hormone and the in-  retrospect that very high production costs become
           terferons. However, as molecular size and fragility  apparent. By then it is too late } regulatory systems
           increase, so difRculties in using HPLC increase,  are Rrmly in place.
           a primary reason why much analysis is still conducted  There is an alternative. If researchers were more
           on low performance systems. Low performance sys-  aware of process economics and the consequences of
           tems are easily scaled up; RP-HPLC is not.      regulatory demand, selection of superior separation
             Biological separation systems must be aseptically  processes could then result. Although most resear-
           clean throughout the process. The mixtures are inevi-  chers are fully aware of the advantages of single-step
           tably complex and usually contain many contamina-  afRnity methods, paradoxically the high selectiv-
           ting similarly structured species. Such species can  ity advantage of afRnity chromatography is also a
           adsorb very strongly onto the medium, demanding  weakness.  Suitable  off-the-shelf  afRnity  adsor-
           post-use washing with very powerful reagents to ster-  bents are often unavailable, in which case an adsor-
           ilize and simultaneously clean the column. Silica-  bent has to be custom synthesized. Since the majority
           based matrices cannot survive this type of treatment,  of biochemists have no desire (or time) to undertake
           hence scale-up of analytical procedures is generally  elaborate chemical synthesis, antibody-based adsor-
           precluded. The Rrst wave of commercial protein  bents are commonly used. However, raising suitable
           pharmaceuticals have generally proved to be relative-  antibodies and purifying them before immobilization
           ly stable under high stress conditions. On the other  onto a preactivated support matrix is an extremely
           hand intracellular proteins, often of high molecular  laborious procedure. In addition, proteins are so of-
           weight, are unstable. Analysis by high performance  ten tightly bound to the antibody that subsequent
           RP-HPLC methods then becomes problematic. De-   elution involves some degree of denaturation and/or
           mand for fast, high resolution, analytical methods  loss of acitivity. Ideal media require the incorporation
           will continue to increase for on-line monitoring and  of elements of both nonselective and selective adsor-
           process validation. Such techniques have already been  bents to provide adsorbents with a general applicabil-
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