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Chapter 2 Implementation of a patient-specific cardiac model 45

























                     Figure 2.2. Overview of the anatomical modeling pipeline based on medical image
                     segmentation.


                     of accuracy and reproducibility, two necessary requirements for
                     clinical applications. Traditionally, methods based on machine
                     learning and shape models have been employed [31,32]. For in-
                     stance, in [202], the authors use a machine-learning framework
                     to segment cardiac structures. Marginal space learning [31]was
                     introduced as an efficient way to learn high dimensional models
                     and perform fast online search by operating on spaces of increas-
                     ing dimensionality. In practice, the location, the orientation, and
                     the scale of the structure of interest are identified sequentially.
                     Anatomical landmarks are then detected inside the resulting re-
                     gion of interest, and a shape model is fitted to match the cardiac
                     surfaces. The model is further refined using boundary detectors.
                     At each step, detectors trained on large databases of annotated
                     images are used. In particular, probabilistic boosting trees [203]
                     are employed, as they can account for patterns of large intra-class
                     variability for complex data distributions. Fig. 2.3 illustrates some
                     segmentation results on various imaging modalities.
                        One advantage of using shape models is their inherent param-
                     eterization. Anatomical landmarks are explicitly encoded: seman-
                     tic associations to the underlying anatomy across patients and
                     modalities is thus automatically provided (Fig. 2.4). As a result,
                     these models are highly modular. For example, cardiac resynchro-
                     nization therapy (CRT) in-silico analysis would benefit from hav-
                     ing the models of both left (LV) and right (RV) ventricles, while
                     advanced flow computation applications would benefit from in-
                     clusion of valve models along with all chambers. In general, such
                     models can provide explicit geometric representations for the left
                     ventricle endocardium, epicardium, mitral annulus, left ventric-
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