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48  Chapter 2 Implementation of a patient-specific cardiac model




                                         2.1.3 Computational model of the cardiac fiber
                                                architecture
                                            The implementation described in this chapter relies on a
                                         rule-based model of myocardium architecture derived from ex-
                                         vivo studies [49,55,56], following a similar strategy as in [45,
                                         57]. The model, which covers fiber orientation and fiber sheets,
                                         can be adapted to the investigated pathology. Let ξ = (f,s,n) be
                                         the local, orthonormal fiber coordinate system, where f is the
                                         fiber direction, s the sheet direction and n the sheet normals.
                                         Fiber and fiber sheet orientations are determined by the angles
                                         α and β defined with respect to the circumferential (e 0 ), lon-
                                         gitudinal (e 1 ) and radial (e 2 )axes(Fig. 2.7). The elevation an-
                                         gle α of the fibers, i.e. their angle with respect to the short axis
                                         plane, varies linearly across the myocardium, from α =−70 de-
                                         grees on the epicardium to α = 0 at mid-wall to α =+70 degrees
                                         on the endocardium. These values could change under disease
                                         conditions, like for instance in hypertrophic cardiomyopathy or
                                         around an area of myocardium infarction. Fiber sheet organi-
                                         zation is less marked and varies more across individuals. The
                                         angles are traditionally assumed to range between β =+45 on
                                         the epicardium to β =−45 on the endocardium, as measured
                                         in [56].














                                         Figure 2.7. Fibers and sheets orientation from endocardium to epicardium. A local
                                         coordinate system based on the circumferential (e 0 ), longitudinal (e 1 ) and radial
                                         (e 2 ) directions is used to define a rule-based model of fiber orientations.


                                            The construction of the model is done in two steps. First, the
                                         fiber coordinate system ξ is estimated from the apex to the base
                                         plane, where endocardial and epicardial fibers and fiber sheets
                                         have a constant angle (Fig. 2.8, left panel). The angles α and β
                                         are then computed throughout the myocardium using linear in-
                                         terpolation. In a second stage, the fiber coordinate system is cal-
                                         culated from the base plane to the valves. Special care is taken
                                         in order to achieve smooth and realistic fiber variations. The co-
                                         ordinate system ξ is first fixed around the valves: fibers are cir-
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