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Exploratory Analysis of Geochemical Anomalies                         79

           input variables. Thus, the first factor accounts for the highest proportion of the ‘total’
                                                              th
           common variance in the input multivariate data, whereas the k  (or last) factor accounts
           for the least proportion of the ‘total’ common variance in the input multivariate data.
           Because the ‘total’ common variance in  n input multivariate data is unknown, the
           ‘optimum’ k common factors must be determined by following a number of statistical
           tests (Basilevsky, 1994)  or ‘rule-of-thumb’ criteria, e.g., factors that cumulatively
           account for at least 70% of the total variance  (Reimann et al., 2002). From the foregoing
           discussion, the following can be said about the applicability of either  PCA or FA in
           geochemical data analysis (cf. Howarth and  Sinding-Larsen, 1983). On  the one  hand,
           PCA is favourable in cases of  geochemical data analysis in which the range of PCs
           representing the ‘most common’ variance to the ‘most specific’ variance in the input
           multi-element data  sets is of interest to allow  recognition of latent inter-element
           variations that reflect the various geochemical processes in a study area. On the other
           hand,  FA is favourable in  cases of  geochemical data analysis in which the  factors
           representing the ‘most common’ variance in  the input multi-element  data sets are  of
           interest to  allow recognition  of latent inter-element relationships that describe the
           different geochemical processes in a study area.
              Therefore, based on the preceding discussion about the difference between PCA and
           FA, the former is considered more appropriate to apply in the case study than the latter
           because of its ‘exploratory’ rather than ‘confirmatory’ nature. In PCA, it is essential to
           use standardised data if the correlation matrix  is used to derive the  PCs or to  use
           unstandardised data if the covariance matrix is used to derive the PCs (Trochimczyk and
           Chayes, 1978). In addition, because estimates of either the correlation coefficient or the
           covariance are influenced by data form, presence of censored values, outliers and more
           than one population, it is also essential to ‘clean’ and transform the data so that they
           approach a (nearly) symmetrical distribution. For the same log e-transformed uni-element
           data sets that were used to create the scatterplots in Fig. 3-18D, the correlation matrix in
           Table 3-V and the covariance matrix in Table 3-VI, the derived PCs are shown in Table
           3-VII. The correlation matrix (Table 3-V) was used to derive the PCs, so the uni-element
           data sets were first standardised using equation (3.11).
              In Table 3-VII, the first two PCs (PC1 and PC2) together explain the ‘most common’
           variance in the  multivariate data and thus represent multi-element  associations that
           reflect the major geochemical processes in the study area. PC1 accounts for at least 58%
           of the total variance and represents a Co-Ni-Zn-Mn-As-Cu association, which reflects a
           plausible combination  (or  overprinting)  of lithologic  and chemical controls. PC2
           explains about 15% of the total variance and represents two antipathetic associations – a
           Cu-Ni association reflecting lithologic control and a Mn-Zn association reflecting metal
           scavenging control by Mn-oxides. Each  of the last four  PCs (PC3-PC6) explains the
           specific variances in the multivariate data and represents multi-element associations that
           reflect either the minor (or subtle) geochemical processes in the study area or errors in
           the multivariate data. PC3 accounts for at least 11% of the total variance and represents
           two antipathetic associations – an  As-dominated multi-element association  reflecting
           mineralisation control and a Co-Ni association  reflecting  lithologic control. The last
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