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W idefield Raman Imaging of Cells and T issues   179



                                 6000
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                              Intensity (a.u)  2000
                                 3000
                                 1000
                                   0
                                –1000
                                –2000
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                                –4000
        Raman Shift @ 876 cm –1         1000  1200  1400  1600  1800
                                                        –1
                                            Raman Shift (cm )
        FIGURE 6.11  Residual image and spectrum from SMR.

        just the underlying glass slide). Figure 6.10 shows each frame of the
        concentration image: glass (Fig. 6.10b), epithelium (Fig. 6.10c), and
        stroma (Fig. 6.10d). The white areas indicate where the spectral sig-
        nature is the greatest, whereas the dark areas indicate where there is
        no spectral signature. Figure 6.11 shows the residual image and the
        associated spectrum. Both the image and the spectrum show noise
        only, indicating that the SMR function was able to classify the spec-
        trum at each pixel with the reference spectra, and that it is likely
        that no other residual spectral species is present in the image. In
        Fig. 6.12, the concentration images were used to create a colorized
        image of the prostate tissue to indicate the location of each of the ref-
        erence species. The blue areas represent epithelium, the red areas rep-
        resent glass slide, and the green areas represent stroma.

        6.5.4 Derivatives
        The spectra of biological tissue or cells obtained from widefield
        Raman images will be very similar. Although the molecular compo-
        sition will be different between different tissues or tissues in differ-
        ent metabolic states, the underlying molecules in each tissue will be
        the same. Spectra are usually compared by overlaying them to see if
        they match. If they have multiple points of identification, such as
        peaks, this is easy to do, especially when the spectra is of a pure
        component. A match can be reported if the peak position and gen-
        eral shape are the same; however, this is not necessarily true of the
        spectra of tissue. Raman spectra of tissue have broader peaks due to
        the mixture of molecules in the tissue sample; therefore when mul-
        tiple spectra are overlaid, the subtle differences in the spectra of bio-
        logical samples can be very important. If there is a subtle difference
        when spectra are overlaid, derivative spectra may be useful to aid
        comparison. When spectral peaks are broad and featureless, their
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