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412     8 Bayesian statistics and parameter estimation





                      11

                      11

                      1

                    θ   1









                                              1   1     11   11
                                              θ 2
                   Figure 8.8 Boundary of the 95% HPD for (θ 2 ,θ 3 ) for the 2-D marginal posterior density of the rate
                   law exponents from the batch reactor data set.

                   Applying eigenvalue analysis to experimental design


                   Above, we have generated confidence intervals from the covariance matrix cov(θ) =
                          −1
                       T
                    2
                                               2
                   σ (X X) . While the value of σ may be determined by fluctuations in experimental
                   conditions that are beyond our control, we can control, through our choice of experimental
                   design, the design matrix X. We would like to design our experiments so that they provide
                   enough information to estimate the parameters to sufficient accuracy. We now consider the
                                                  T
                   application of eigenvalue analysis of X X to experimental design.
                                                                  T          T
                     We diagonalize the positive-semidefinite matrix X X = V  V , where   =
                   diag(λ 1 ,λ 2 ,...,λ P ),and P = dim(θ).ThematrixVisanorthogonal P×P matrix, V  −1  =
                                                                     T
                    T
                   V , whose columns contain the normalized eigenvectors of X X. The covariance matrix
                   of θ is
                                          T −1
                                                                  2
                                                 2
                                                         −1
                                   2
                                                                      −1
                          cov(θ) = σ [V  V ]  = σ V  T(−1)    V  −1  = σ V   V  T    (8.169)
                                               −1
                                                                                T
                                   −1
                                       −1
                   where   −1  = diag(λ ,λ ,...,λ ). We see that the small eigenvalues of X X, with the
                                   1   2       P
                                                       −1
                   corresponding largest diagonal elements in   , contribute the most to the uncertainty.
                                                     T
                     When is an eigenvalue λ j satisfying (X X)v [ j]  = λ j v [ j]  small? Writing
                                                                      [1]  [ j]  
                                                [1]                 x  · v
                                             — x    —       
                                                           |          x [2]  · v  [ j] 
                                T
                                                          v
                      λ j v [ j]  = (X X)v [ j]  T   . .     [ j]   T   .      (8.170)
                                                 .            = X      .    
                                       = X 
                                                                        .    
                                             — x [N]  —    |           [N]  [ j]
                                                                      x  · v
                   we see that we obtain a small eigenvalue whenever no row in the design matrix has a
                   significant dot product with the corresponding eigenvector.
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